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2003 Arabidopsis Catalog

Book:"Methods in Arabidopsis Research"
BOOK:"METH0DS IN ARABIDOPSIS RESEARCH"

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Asymmetrical ligand binding by abscisic acid 8'-hydroxylase.
Ueno K, Yoneyama H, Mizutani M, Hirai N, Todoroki Y.

Effect of the minor ABA metabolite 7'-hydroxy-ABA on Arabidopsis ABA 8'-hydroxylase CYP707A3.
Shimomura H, Etoh H, Mizutani M, Hirai N, Todoroki Y.

Determination of metabolic fluxes in a non-steady-state system.
Baxter CJ, Liu JL, Fernie AR, Sweetlove LJ.

Structural properties of caleosin: A MS and CD study.
Purkrtova Z, d'Andrea S, Jolivet P, Lipovova P, Kralova B, Kodicek M, Chardot T.

Developmental steps in acquiring competence for shoot development in Arabidopsis tissue culture.
Che P, Lall S, Howell SH.

The Arabidopsis ALDP protein homologue COMATOSE is instrumental in peroxisomal acetate metabolism.
Hooks MA, Turner JE, Murphy EC, Johnston KA, Burr S, Jaroslawski S.

The screening of interaction factors with BoCAL and BoAP1 related to curd formation
An YH, Li XF, Zhu JX, Shao XH, Sun Y, Xiong LJ.

Peroxisomal metabolism of propionic acid and isobutyric acid in plants.
Lucas KA, Filley JR, Erb JM, Graybill ER, Hawes JW.

Developmental and stimulus-induced expression patterns of Arabidopsis calmodulin-like genes CML37, CML38 and CML39.
Vanderbeld B, Snedden WA.

Epigenetic Natural Variation in Arabidopsis thaliana.
Vaughn MW, Tanurd Ic M, Lippman Z, Jiang H, Carrasquillo R, Rabinowicz PD, Dedhia N, McCombie WR, Agier N, Bulski A, Colot V, Doerge RW, Martienssen RA.

DICER-LIKE 1 and DICER-LIKE 3 Redundantly Act to Promote Flowering via Repression of FLOWERING LOCUS C in Arabidopsis thaliana.
Schmitz RJ, Hong L, Fitzpatrick KE, Amasino RM.

Transposition of the rice miniature inverted repeat transposable element mPing in Arabidopsis thaliana.
Yang G, Zhang F, Hancock CN, Wessler SR.

Signalling mechanisms underlying the morphological responses of the root system to nitrogen in Arabidopsis thaliana.
Zhang H, Rong H, Pilbeam D.

Genome-wide analysis of intronless genes in rice and Arabidopsis.
Jain M, Khurana P, Tyagi AK, Khurana JP.

Phytotoxic Effects of 21 Plant Secondary Metabolites on Arabidopsis thaliana Germination and Root Growth.
Reigosa MJ, Pazos-Malvido E.

An early response regulatory cluster induced by low temperature and hydrogen peroxide in seedlings of chilling-tolerant japonica rice.
Cheng C, Yun KY, Ressom HW, Mohanty B, Bajic VB, Jia Y, Yun SJ, de Los Reyes BG.

A new systematic computational approach to predicting target genes of transcription factors.
Dai X, He J, Zhao X.

A novel endonuclease activity associated with the Arabidopsis ortholog of the 30-kDa subunit of cleavage and polyadenylation specificity factor.
Addepalli B, Hunt AG.

Constitutive expression of two apple (Malus x domestica Borkh.) homolog genes of LIKE HETEROCHROMATIN PROTEIN1 affects flowering time and whole-plant growth in transgenic Arabidopsis.
Mimida N, Kidou SI, Kotoda N.

TLP18.3, a novel thylakoid lumen protein regulating photosytem II repair cycle.
Sirpio S, Allahverdiyeva Y, Suorsa M, Paakkarinen V, Vainonen J, Battchikova N, Aro EM.

Environmental genomics: mechanistic insights into toxicity of and resistance to the herbicide 2,4-D.
Teixeira MC, Duque P, Sa-Correia I.

Regulation of plant innate immunity by three proteins in a complex conserved across the plant and animal kingdoms.
Palma K, Zhao Q, Cheng YT, Bi D, Monaghan J, Cheng W, Zhang Y, Li X.

Molecular analysis of Agrobacterium T-DNA integration in tomato reveals a role for left border sequence homology in most integration events.
Thomas CM, Jones JD.

Efficiency of gene silencing in Arabidopsis: direct inverted repeats vs. transitive RNAi vectors.
Filichkin SA, Difazio SP, Brunner AM, Davis JM, Yang ZK, Kalluri UC, Arias RS, Etherington E, Tuskan GA, Strauss SH.

Selection of plants for roles in phytoremediation: the importance of glucosylation.
Brazier-Hicks M, Edwards LA, Edwards R.

Layered basal defenses underlie non-host resistance of Arabidopsis to Pseudomonas syringae pv. phaseolicola.
Ham JH, Kim MG, Lee SY, Mackey D.

miR172 regulates stem cell fate and defines the inner boundary of APETALA3 and PISTILLATA expression domain in Arabidopsis floral meristems.
Zhao L, Kim Y, Dinh TT, Chen X.

Novel Insights into Seed Fatty Acid Synthesis and Modification Pathways from Genetic Diversity and QTL Analysis of the Brassica C genome.
Barker GC, Larson TR, Graham IA, Lynn JR, King GJ.

Mutations in the Type II Protein Arginine Methyltransferase AtPRMT5 Result in Pleiotropic Developmental Defects in Arabidopsis thaliana.
Pei Y, Niu L, Lu F, Liu C, Zhai J, Kong X, Cao X.

A Novel Nucleus-encoded Chloroplast Protein, PIFI, Is Involved in NAD(P)H Dehydrogenase Complex Mediated Chlororespiratory Electron Transport in Arabidopsis.
Wang D, Portis AR Jr.

SDIR1 Is a RING Finger E3 Ligase That Positively Regulates Stress-Responsive Abscisic Acid Signaling in Arabidopsis.
Zhang Y, Yang C, Li Y, Zheng N, Chen H, Zhao Q, Gao T, Guo H, Xie Q.

Arabidopsis Cytochrome P450 Monooxygenase 71A13 Catalyzes the Conversion of Indole-3-Acetaldoxime in Camalexin Synthesis.
Nafisi M, Goregaoker S, Botanga CJ, Glawischnig E, Olsen CE, Halkier BA, Glazebrook J.

Genome-Wide Analysis of LIM Gene Family in Populus trichocarpa, Arabidopsis thaliana, and Oryza sativa.
Arnaud D, Dejardin A, Leple JC, Lesage-Descauses MC, Pilate G.

Regulation of root nitrate uptake at the NRT2.1 protein level in Arabidopsis thaliana.
Wirth J, Chopin F, Santoni V, Viennois G, Tillard P, Krapp A, Lejay L, Daniel-Vedele F, Gojon A.

A Dinoflagellate AAA Family Member Rescues a Conditional Yeast G1/S Phase Cyclin Mutant through Increased CLB5 Accumulation.
Bertomeu T, Morse D.

Restricted cell elongation in Arabidopsis hypocotyls is associated with a reduced average pectin esterification level.
Derbyshire P, McCann MC, Roberts K.

PRT6/At5g02310 encodes an Arabidopsis ubiquitin ligase of the N-end rule pathway with arginine specificity and is not the CER3 locus.
Garzon M, Eifler K, Faust A, Scheel H, Hofmann K, Koncz C, Yephremov A, Bachmair A.

Genetic interaction and phenotypic analysis of the Arabidopsis MAP kinase pathway mutations mekk1 and mpk4 suggests signaling pathway complexity.
Su SH, Suarez-Rodriguez MC, Krysan P.

Two rice cytosolic ascorbate peroxidases differentially improve salt tolerance in transgenic Arabidopsis.
Lu Z, Liu D, Liu S.

Idiosyncratic cleavage and ligation activity of individual hammerhead ribozymes and core sequence variants thereof.
Przybilski R, Hammann C.

Applications of EcR gene switch technology in functional genomics.
Tavva VS, Palli SR, Dinkins RD, Collins GB.

Modification of cell proliferation patterns alters leaf vein architecture in Arabidopsis thaliana.
Kang J, Mizukami Y, Wang H, Fowke L, Dengler NG.

FTICR-MS analysis of 14-3-3 isoform substrate selection.
Cardasis HL, Sehnke PC, Laughner B, Eyler JR, Powell DH, Ferl RJ.

The intron of the Arabidopsis thaliana COX5c gene is able to improve the drought tolerance conferred by the sunflower Hahb-4 transcription factor.
Cabello JV, Dezar CA, Manavella PA, Chan RL.

The pds2 mutation is a lesion in the Arabidopsis homogentisate solanesyltransferase gene involved in plastoquinone biosynthesis.
Tian L, Dellapenna D, Dixon RA.

TCP Transcription Factors Predate the Emergence of Land Plants.
Navaud O, Dabos P, Carnus E, Tremousaygue D, Herve C.

Measuring the Osmotic Water Permeability of the Plant Protoplast Plasma Membrane: Implication of the Nonosmotic Volume.
Sommer A, Mahlknecht G, Obermeyer G.

An Arabidopsis quiescin-sulfhydryl oxidase regulates cation homeostasis at the root symplast-xylem interface.
Alejandro S, Rodriguez PL, Belles JM, Yenush L, Garcia-Sanchez MJ, Fernandez JA, Serrano R.

The Arabidopsis Spontaneous Cell Death1 gene, encoding a zeta-carotene desaturase essential for carotenoid biosynthesis, is involved in chloroplast development, photoprotection and retrograde signalling.
Dong H, Deng Y, Mu J, Lu Q, Wang Y, Xu Y, Chu C, Chong K, Lu C, Zuo J.

AtMAP70-5, a divergent member of the MAP70 family of microtubule-associated proteins, is required for anisotropic cell growth in Arabidopsis.
Korolev AV, Buschmann H, Doonan JH, Lloyd CW.

Phytochrome Chromophore Deficiency Leads to Overproduction of Jasmonic Acid and Elevated Expression of Jasmonate-Responsive Genes in Arabidopsis.
Zhai Q, Li CB, Zheng W, Wu X, Zhao J, Zhou G, Jiang H, Sun J, Lou Y, Li C.

Enhanced Separation of Membranes during Free Flow Zonal Electrophoresis in Plants.
Barkla BJ, Vera-Estrella R, Pantoja O.

Over-expression of OsUGE-1 altered raffinose level and tolerance to abiotic stress but not morphology in Arabidopsis.
Liu HL, Dai XY, Xu YY, Chong K.

A conserved role of SHORT VEGETATIVE PHASE (SVP) in controlling flowering time of Brassica plants.
Lee JH, Park SH, Lee JS, Ahn JH.

Identifying, cloning and structural analysis of differentially expressed genes upon Puccinia infection of Festuca rubra var. rubra.
Ergen NZ, Dinler G, Shearman RC, Budak H.

Arabidopsis fhl/fhy1 double mutant reveals a distinct cytoplasmic action of phytochrome A.
Rosler J, Klein I, Zeidler M.

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Sales Manager Messages                                                           archives
 08 May 2007 Custom Project Price Guide - Fall 2007 

Pricing for custom project services for the Fall 2007 production cycle are shown in the following table.  

Destination of Project Products

USA

Foreign

Genome Classification

Service

Non-
Transgenic
Transgenic Non-
Transgenic
Transgenic
Custom EMS mutation for M1 seeds  $2,090 $2,290 $2,090 $2,590
Custom EMS mutation for M2 seeds¥ $2,140 $2,340 $2,140 $2,640
Custom M1 grow-out & selfing to M2, 12 flats (minimum)§ $2,900 $3,200 $2,900 $3,200
Total $5,040 $5,540 $5,040 $5,840
Fee covers mutation and M1 seed drying services.   A maximum of 1.5 grams of seeds are mutated per batch and then dried and shipped.  Includes chemical waste neutralization, treatment and disposal services.   Where applicable, includes extra fees associated with transgenic biologicals such as their 1) special handling, containment and disposal and 2) compliance with USDA APHIS regulations to obtain a project specific importation permit.  Shipping and any related costs are not included.  A $500 retainer is required to engage this service. Billing is monthly thereafter.

¥  Fee covers mutation and M1 seed stratification services.  A maximum of 1.5 grams of seeds are mutated per batch and stratified at 5 C in preparation of planting. Fees for actual planting and grow-out of M1 seeds are covered in following service.  Includes chemical waste neutralization, treatment and disposal services.  Where applicable, includes extra fees associated with transgenic biologicals such as their 1) special handling, containment and disposal and 2) compliance with any or all  USDA APHIS regulations to obtain a project specific importation permit.  Shipping and any related costs are not included.  A $500 retainer is required to engage this service. Billing is monthly thereafter.

§ Fee covers M1 seed sowing, growing, maintaining, selfing, harvesting, cleaning and packaging of M2 progeny seeds for 4-5 months.  This service is paired with and follows the Custom EMS mutation service for M2 (above).  M1 seed are planted to achieve a target stand of 1,100  M1 parents on each of a minimum of twelve 28 x 56 cm greenhouse flats.  Sowing rate is 0.06 grams per flat.  Add $242 or $267 for each additional flat for non-transgenic and transgenic seeds, respectively. Fee includes a stand count, embryo test for mutation frequency estimation and remote monitoring of project via images posted to our web site. Where applicable, includes extra fees associated with rendering harmless and disposing of transgenic biologicals or medium containing  their residues.  Shipping and any related costs are not included.  Billing is monthly.  

19 Feb 2007  Effective today, prices of ARASYSTEM components will be increased across the product line an average of 2.3% to reflect recent devaluation in the dollar.

Production Manager Messages                                                     archives
19 Apr 2007  Notice of Custom Project Schedule

The schedule for custom projects for the remainder of 2007 and the first half of 2008 have been finalized.  Custom projects requiring a grow-out of M2 seeds must be initiated either in the months of September 2007 or February 2008.  This scheduling is required so custom projects coincide with our regular growth room operations.  LEHLE SEEDS currently idles its growth rooms from June to August for insect control, equipment maintenance, cleaning and disinfection.  The time is also used for processing chemical waste and growth medium waste prior to disposal.  Important deadlines are summarized in the following two sections.

  Fall 2007 Custom Projects - Reservations now being accepted

15 Jul 2007 - Last day to submit application for importation permit for September 2007 custom projects where client is 1) outside the U.S.A. and seeds are 2) transgenic.

01 Sep 2007 - Last day to receive seeds for September 2007 custom projects.  Seeds received after this date will be scheduled for February 2008.

01 Sep 2007 - 30 Sep 2007 Dates when custom projects with M2 grow-out will be initiated.  Projects not initiated by 30 Sep 2007 will be scheduled for February 2008.

31 Jan 2008 (or earlier) - Fall 2007 custom project harvesting complete.

  Spring 2008 Custom Projects - Reservations now being accepted

15 Dec 2007 - Last day to submit application for importation permit for February 2008 custom projects where client is 1) outside the U.S.A. and seeds are 2) transgenic.

01 Feb 2008 - Last day to receive seeds for September 2007 custom projects.  Seeds received after this date will be scheduled for September 2008.

01 Feb 2008 - 29 Feb 2008 Dates when custom projects with M2 grow-out  will be initiated.  Projects not initiated by 29 Feb 2008 will be scheduled for Sep 2008.

30 Jun 2008 (or earlier) - Spring 2008 custom project harvesting complete.

        Additional information concerning custom projects

Space in our growing rooms is limited and projects are assigned to the available space on a first come, first serve basis.  Projects that involve the importation of transgenic seeds into the U.S. will require LEHLE SEEDS to obtain a special USDA APHIS importation permit.  The permit process is such that the application should be started in July 2007 for the September custom projects and in December 2007 for the February 2008 custom projects.  For September 2007 projects, seeds must be in our hands no later than September 1, 2007.  For February 2008 projects, seeds must be in our hands no later than February 1, 2008.  Transgenic as well as non-transgenic seeds can be submitted, but transgenic seeds can only be imported to the USA under a special USDA APHIS which LEHLE SEEDS will obtain for its foreign customers before importation.  Contact Fred Lehle, Ph.D. by email if you have additional questions or interest. 

            Custom projects involving no M1 grow-out

Custom projects with immediate return of air-dried M1 seeds will be conducted only during the months of September - October 2007 and February - March 2008.

 
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